|Web service||URL||Source code|
|GeneTrail2||https://genetrail2.bioinf.uni-sb.de||C++ code for enrichment algorithms (https://github.com/unisb-bioinf/genetrail2)|
|NetworkTrail||https://networktrail.bioinf.uni-sb.de||C++ code for subgraph ILP (http://genetrail.bioinf.uni-sb.de/ilp/Home.html)|
DrugTargetInspector (DTI) is an interactive assistance tool for treatment stratification. DTI analyzes genomic, transcriptomic and proteomic datasets and provides information on deregulated drug targets, enriched biological pathways and deregulated subnetworks, as well as mutations and their potential effects on putative drug targets and genes of interest. Please refer to our publication for further details and case studies (doi: 10.1002/ijc.29897).
GeneTrail2 is a web-interface providing access to different tools for the statistical analysis of molecular signatures. GeneTrail2 allows the integrated analysis of transcriptomic, miRNomic, genomic, and proteomic datasets. It offers multiple statistical tests, a large number of predefined reference sets, as well as a comprehensive collection of biological categories and enables direct comparisons between the computed results.
NetworkTrail is a web-interface providing access to different analysis tools for regulatory networks.